1EG5

NIFS-LIKE PROTEIN

Structural Biology Knowledgebase: 1EG5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1EG5

Classification: TRANSFERASE

Total Structure Weight: 87582.09

Macromolecule Entities
Molecule Chains Length Organism Details
AMINOTRANSFERASE A, B 384 Thermotoga maritima Mutation: M1M, M21M, M38M, M46M, M106M, M111M, M146M, M251M, M265M, M277M, S332R, M338M
Details: NIFS-LIKE PROTEIN
Gene Name(s): TM_1692 Tmari_1700
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A, B PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.211
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 114.11 α = 90.00
b = 114.11 β = 90.00
c = 156.96 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-02-13
  • Released Date: 2000-04-02
  • Deposition author(s): Kaiser, J.T., Clausen, T., Bourenkow, G.P., Bartunik, H.-D., Steinbacher, S., Huber, R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Non-polymer description | Details: chemical name/synonym update