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CRYSTAL STRUCTURE OF AN ADENINE BULGE IN THE RNA CHAIN OF A DNA/RNA HYBRID, D(CTCCTCTTC)/R(GAAGAGAGAG)
DOI:10.2210/pdb1efo/pdb   NDB ID: AH0010
1EFO
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: DNA RNA Hybrid
    Structure Weight: 5944.87
    Molecule: DNA (5'-D(*CP*TP*CP*CP*TP*CP*TP*TP*C)-3')
    Polymer: 1 Type: dna Length: 9
    Chains: A
    Molecule: RNA (5'-R(*GP*AP*AP*GP*AP*GP*AP*GP*AP*G)-3')
    Polymer: 2 Type: rna Length: 10
    Chains: B
     
  •   Structure Validation Hide

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  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
     
  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure: AH0010
     
 
Data in orange boxes are gathered from external resources (when available).
 
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Sudarsanakumar, C.,  Xiong, Y.,  Sundaralingam, M.

    Deposition:   2000-02-09
    Release:   2000-05-29
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.30
    R-Value: 0.199 (obs.)
    R-Free: 0.222
    Space Group: I 2 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 46.66 α = 90.00 
    b = 47.61 β = 90.00 
    c = 54.04 γ = 90.00