1EDU

CRYSTAL STRUCTURE OF THE ENTH DOMAIN OF RAT EPSIN 1

Structural Biology Knowledgebase: 1EDU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.206

Literature

Macromolecules
Sequence Display for 1EDU

Classification: ENDOCYTOSIS / EXOCYTOSIS

Total Structure Weight: 17808.41

Macromolecule Entities
Molecule Chains Length Organism Details
EH domain binding protein EPSIN A 149 Rattus norvegicus Fragment: N-TERMINAL FRAGMENT
Mutation: M30M, M47M, M49M, M68M, M71M, M90M
Gene Name(s): Epn1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EDO
Query on EDO

A 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.224
  • R-Value Work: 0.206
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 49.81 α = 90.00
b = 49.81 β = 90.00
c = 99.97 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-28
  • Released Date: 2000-05-10
  • Deposition author(s): Hyman, J.H., Chen, H., Decamilli, P., Brunger, A.T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4