1ECX

NIFS-LIKE PROTEIN

Structural Biology Knowledgebase: 1ECX SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.207

Literature

Macromolecules
Sequence Display for 1ECX

Classification: TRANSFERASE

Total Structure Weight: 86600.48

Macromolecule Entities
Molecule Chains Length Organism Details
AMINOTRANSFERASE A, B 384 Thermotoga maritima Mutation: S332R
Details: NIFS-LIKE PROTEIN
Gene Name(s): TM_1692 Tmari_1700
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PLP
Query on PLP

A, B PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CYS
Query on CYS

A, B CYSTEINE
C3 H7 N O2 S
XUJNEKJLAYXESH-REOHCLBHSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.207
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 115.41 α = 90.00
b = 115.41 β = 90.00
c = 156.95 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-01-26
  • Released Date: 2000-03-20
  • Deposition author(s): Kaiser, J.T., Clausen, T.C., Bourenkow, G.P., Bartunik, H.-D., Steinbacher, S., Huber, R.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4