1EB8

STRUCTURE DETERMINANTS OF SUBSTRATE SPECIFICITY OF HYDROXYNITRILE LYASE FROM MANIHOT ESCULENTA

Structural Biology Knowledgebase: 1EB8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.192

Literature

Macromolecules
Sequence Display for 1EB8

Classification: LYASE

Total Structure Weight: 59677.01

Macromolecule Entities
Molecule Chains Length Organism Details
(S)-ACETONE-CYANOHYDRIN LYASE A, B 262 Manihot esculenta EC#: 4.1.2.47 IUBMB
Mutation: W128A
Gene Name(s): HNL
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.192
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 106.40 α = 90.00
b = 106.40 β = 90.00
c = 188.43 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2001-07-24
  • Released Date: 2002-01-01
  • Deposition author(s): Lauble, H., Miehlich, B., Foerster, S., Kobler, C., Wajant, H., Effenberger, F.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4