STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING
1E4H
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transport Protein
    Structure Weight: 28716.37
    Molecule: TRANSTHYRETIN
    Polymer: 1 Type: protein Length: 127
    Chains: A, B
    Organism: Homo sapiens
    Gene Names: Gene View for TTR PALB
    UniProtKB: Protein Feature View | Search PDB | P02766  
     
  •   Structure Validation Hide

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  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human  
     
  •   Related PDB Entries Hide
    Identifier Details
    1BM7    
    1BMZ    
    1BZ8   TRANSTHYRETIN (DEL VAL122) 
    1BZD   TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1BZE   TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1E3F   STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING 
    1E5A   STRUCTURE OF HUMAN TRANSTHYRETIN COMPLEXED WITH BROMOPHENOLS: A NEW MODE OF BINDING 
    1ETA    
    1ETB    
    1QAB    
    1RLB    
    1THA    
    1THC    
    1TLM    
    1TSH   TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    1TTA   TRANSTHYRETIN (FORMERLY PREALBUMIN) 
    1TTB    
    1TTC    
    1TTR   TRANSTHYRETIN - V/122/I CARDIOMYOPATHIC MUTANT 
    1TYR    
    2PAB    
    2ROX   TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH THYROXINE (T4) 
    2ROY   TRANSTHYRETIN (ALSO CALLED PREALBUMIN) COMPLEX WITH 3',5'-DINITRO-N-ACETYL-L-THYRONINE 
    2TRH   TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    2TRY   TERTIARY STRUCTURES OF THREE AMYLOIDOGENIC TRANSTHYRETIN VARIANTS AND IMPLICATIONS FOR AMYLOID FIBRIL FORMATION 
    5TTR   LEU 55 PRO TRANSTHYRETIN CRYSTAL STRUCTURE 
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    GOL
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    GOL C3 H8 O3
    GLYCEROL
    PBR
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    PBR C6 H Br5 O
    PENTABROMOPHENOL
    PBR:1E4H
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    PBR
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    PBR
    N/Ain BindingDB
    Kd: 3.9 nM - data from BindingMOAD  
    N/Ain PDBbind
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 generated by PISA (software)
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  •   Deposition Summary Hide
    Authors:   Ghosh, M.,  Meerts, I.A.T.M.,  Cook, A.,  Bergman, A.,  Brouwer, A.,  Johnson, L.N.

    Deposition:   2000-07-04
    Release:   2000-08-29
    Last Modified (REVDAT):   2011-09-21
     
  •   Revision History    Hide
    Mouse over text for details
    2011-09-21
    Function and keywords
    2011-09-21
    Other
    2011-09-21
    Biological assembly
    2011-09-21
    Version format compliance
    2011-09-21
    Polymer description
    2011-09-21
    Non-polymer description
    2011-09-21
    Geometry validation
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   1.80
    R-Value: 0.193 (obs.)
    R-Free: 0.235
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 43.00 α = 90.00 
    b = 85.40 β = 90.00 
    c = 64.40 γ = 90.00