1E19

Structure of the carbamate kinase-like carbamoyl phosphate synthetase from the hyperthermophilic archaeon Pyrococcus furiosus bound to ADP

Structural Biology Knowledgebase: 1E19 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.183

Literature

Macromolecules
Sequence Display for 1E19

Classification: TRANSFERASE

Total Structure Weight: 69854.74

Macromolecule Entities
Molecule Chains Length Organism Details
CARBAMATE KINASE A, B 314 Pyrococcus furiosus EC#: 2.7.2.2 IUBMB
Gene Name(s): cpkA cpa PF0676
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ADP
Query on ADP

A, B ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.218
  • R-Value Work: 0.183
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 55.40 α = 90.00
b = 91.70 β = 90.00
c = 133.80 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-28
  • Released Date: 2000-07-04
  • Deposition author(s): Ramon-Maiques, S., Marina, A., Uriarte, M., Fita, I., Rubio, V.

Revision History

  • 2012-05-30
    Type: Function and keywords | Details: KEYWDS
  • 2012-05-30
    Type: Other | Details: REMARK 525
  • 2012-05-30
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2012-05-30
    Type: Geometry validation | Details: REMARK 500
  • 2012-05-30
    Type: Polymer description | Details: COMPND
  • 2012-05-30
    Type: Citation | Details: JRNL
  • 2012-05-30
    Type: Sequence database correspondence | Details: DBREF
  • 2012-05-30
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2012-05-30
    Type: Version format compliance | Details: REMARK 4