1DI0

CRYSTAL STRUCTURE OF LUMAZINE SYNTHASE FROM BRUCELLA ABORTUS

Structural Biology Knowledgebase: 1DI0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1DI0

Classification: TRANSFERASE

Total Structure Weight: 87934.39

Macromolecule Entities
Molecule Chains Length Organism Details
LUMAZINE SYNTHASE A, B, C, D, E 158 Brucella abortus EC#: 2.5.1.78 IUBMB
Mutation: R88D
Gene Name(s): ribH2 ribH ribH-2 BruAb2_0535
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PO4
Query on PO4

A, B, C, D, E PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.180
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 142.25 α = 90.00
b = 142.25 β = 90.00
c = 242.30 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-11-28
  • Released Date: 2000-04-24
  • Deposition author(s): Braden, B.C., Velikovsky, C.A., Cauerhff, A.A., Polikarpov, I., Goldbaum, F.A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4