1DEH

CRYSTALLIZATION OF HUMAN BETA1 ALCOHOL DEHYDROGENASE (15 MG/ML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+ AND 1 MM 4-IODOPYRAZOLE AT 25 OC, 13% (W/V) PEG 8000


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1DEH

Classification: OXIDOREDUCTASE

Total Structure Weight: 81558.44

Macromolecule Entities
Molecule Chains Length Organism Details
HUMAN BETA1 ALCOHOL DEHYDROGENASE A, B 374 Homo sapiens EC#: 1.1.1.1 IUBMB
Details: THE STRUCTURE FOR HOMODIMERIC BETA1 ALCOHOL DEHYDROGENASE WAS SOLVED WITH ONE NAD+ AND ONE 4-IODOPYRAZOLE PER SUBUNIT
Gene Name(s): ADH1B Gene View ADH2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAD
Query on NAD

A, B NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PYZ
Query on PYZ

A, B 4-IODOPYRAZOLE
C3 H3 I N2
LLNQWPTUJJYTTE-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
NAD N/A in BindingDB
Kd: 1900 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.180
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 54.04 α = 92.56
b = 44.54 β = 103.26
c = 93.32 γ = 68.84

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1995-10-14
  • Released Date: 1996-03-08
  • Deposition author(s): Hurley, T.D., Davis, G.J.

Revision History

  • Version 1_0: 1996-03-08

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance