DNA (CYTOSINE-5) METHYLASE FROM HAEIII COVALENTLY BOUND TO DNA
DOI:10.2210/pdb1dct/pdb   NDB ID: PDEB19
1DCT
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/dna
    Structure Weight: 96494.62
    Molecule: DNA (5'-D(*AP*CP*CP*AP*GP*CP*AP*GP*GP*(C49)P*CP*AP*CP*CP*AP*GP*TP*G)-3')
    Polymer: 1 Type: dna Length: 18
    Chains: F, G
    Molecule: DNA (5'-D(*TP*CP*AP*CP*TP*GP*GP*TP*GP*GP*(C5M)P*CP*TP*GP*CP*TP*GP*G)-3')
    Polymer: 2 Type: dna Length: 18
    Chains: M, N
    Molecule: PROTEIN (MODIFICATION METHYLASE HAEIII)
    Polymer: 3 Type: protein Length: 324
    Chains: A, B
    EC#: 2.1.1.37   
    Organism: Haemophilus influenzae biotype aegyptius
    Gene Name: haeIIIM
    UniProtKB: Protein Feature View | Search PDB | P20589  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Haemophilus influenzae biotype aegyptius   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    CA
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    CA Ca
    CALCIUM ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    C49
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    C49 C10 H15 F N3 O7 P S DC dnaLinking
    5CM
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    5CM C10 H16 N3 O7 P DC dnaLinking
     
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  •   Structural Biology Knowledgebase Data Hide
     
  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PDEB19
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Reinisch, K.M.,  Chen, L.,  Verdine, G.L.,  Lipscomb, W.N.

    Deposition:   1995-05-17
    Release:   1995-09-15
    Last Modified (REVDAT):   2009-02-24
     
  •   Revision History    Hide
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
    N/A
    Resolution[Å]:   2.80
    R-Value: 0.226 (obs.)
    R-Free: 0.326
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 57.57 α = 90.00 
    b = 108.04 β = 90.00 
    c = 155.79 γ = 90.00