1DBM

MOLECULAR BASIS OF CROSS-REACTIVITY AND THE LIMITS OF ANTIBODY-ANTIGEN COMPLEMENTARITY


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Observed: 0.218

Literature

Macromolecules
Sequence Display for 1DBM

Classification: IMMUNOGLOBULIN

Total Structure Weight: 48065.78

Macromolecule Entities
Molecule Chains Length Organism Details
IGG1-KAPPA DB3 FAB (LIGHT CHAIN) L 216 Mus musculus Mutation: I2V, S7I, S14N, V27BL, V27CI, E34H, F36Y, I48M, S56Y, V85I, Y87F, F89S, A91S, W96P
IGG1-KAPPA DB3 FAB (HEAVY CHAIN) H 219 Mus musculus Gene Name(s): Ighg1 Igh-4
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SIH
Query on SIH

H PROGESTERONE-11-ALPHA-OL-HEMISUCCINATE
C25 H34 O6
JBBNFGYRYNBDIH-DBGGZKJISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Observed: 0.218
  • Space Group: P 64 2 2

Unit Cell:

Length (Å) Angle (°)
a = 134.76 α = 90.00
b = 134.76 β = 90.00
c = 124.21 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1993-08-24
  • Released Date: 1994-01-31
  • Deposition author(s): Arevalo, J.H., Wilson, I.A.

Revision History

  • Version 1_0: 1994-01-31

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance