1D8U

CRYSTAL STRUCTURE OF NON-SYMBIOTIC PLANT HEMOGLOBIN FROM RICE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.208

Literature

Macromolecules
Sequence Display for 1D8U

Classification: OXYGEN STORAGE / TRANSPORT

Total Structure Weight: 38172.15

Macromolecule Entities
Molecule Chains Length Organism Details
NON-SYMBIOTIC HEMOGLOBIN A, B 166 Oryza sativa Gene Name(s): HB1 GLB1A Os03g0233900 LOC_Os03g13140 OJ1175C11.5
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEM
Query on HEM

A, B PROTOPORPHYRIN IX CONTAINING FE
HEME (Synonym)
C34 H32 Fe N4 O4
KABFMIBPWCXCRK-RGGAHWMASA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.208
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 126.80 α = 90.00
b = 126.80 β = 90.00
c = 55.50 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-26
  • Released Date: 2001-01-10
  • Deposition author(s): Hargrove, M., Brucker, E.A., Stec, B., Olson, J.S., Phillips Jr., G.N.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4