1D5N

CRYSTAL STRUCTURE OF E. COLI MNSOD AT 100K

Structural Biology Knowledgebase: 1D5N SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 1D5N

Classification: OXIDOREDUCTASE

Total Structure Weight: 92208.09

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (MANGANESE SUPEROXIDE DISMUTASE) A, B, C, D 205 Escherichia coli EC#: 1.15.1.1 IUBMB
Gene Name(s): sodA b3908 JW3879
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A, B, C, D MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.194
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 99.11 α = 90.00
b = 107.30 β = 90.00
c = 179.11 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-08
  • Released Date: 2000-03-02
  • Deposition author(s): Borgstahl, G.E.O., Pokross, M., Chehab, R., Sekher, A., Snell, E.H.

Revision History

  • 2011-11-16
    Type: Atom occupancy | Details: Atom occupancy
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4