1D5H

Rnase s(f8a). mutant ribonucleasE S.

Structural Biology Knowledgebase: 1D5H SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.210

Literature

Macromolecules
Sequence Display for 1D5H

Classification: HYDROLASE

Total Structure Weight: 13066.74

Macromolecule Entities
Molecule Chains Length Organism Details
S PEPTIDE A 15 Bos taurus EC#: 3.1.27.5 IUBMB
Fragment: RESIDUES 1-15
Mutation: F8A
Details: SYNTHETIC
Gene Name(s): RNASE1 Gene View RNS1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RNASE S B 101 Bos taurus EC#: 3.1.27.5 IUBMB
Fragment: RESIDUES 24-124
Gene Name(s): RNASE1 Gene View RNS1

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
SET
Query on SET
A L-PEPTIDE LINKING C3 H8 N2 O2 SER

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.25 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.210
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 44.71 α = 90.00
b = 44.71 β = 90.00
c = 97.52 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-10-07
  • Released Date: 1999-10-20
  • Deposition author(s): Ratnaparkhi, G.S., Varadarajan, R.

Revision History

  • 2017-02-01
    Type: Entry authorship | Details: --
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4