1D48

STRUCTURE OF THE PURE-SPERMINE FORM OF Z-DNA (MAGNESIUM FREE) AT 1 ANGSTROM RESOLUTION

Structural Biology Knowledgebase: 1D48 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Observed: 0.185

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1D48

Classification: DNA

Total Structure Weight: 3822.78

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*CP*GP*CP*G)-3') A, B 6 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SPM
Query on SPM

A SPERMINE
C10 H26 N4
PFNFFQXMRSDOHW-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.0 Å
  • R-Value Observed: 0.185
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 18.41 α = 90.00
b = 30.77 β = 90.00
c = 43.15 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1991-09-11
  • Released Date: 1992-04-15
  • Deposition author(s): Egli, M., Williams, L.D., Gao, Q., Rich, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4