1D2Z

THREE-DIMENSIONAL STRUCTURE OF A COMPLEX BETWEEN THE DEATH DOMAINS OF PELLE AND TUBE

Structural Biology Knowledgebase: 1D2Z SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.211

Literature

Macromolecules
Sequence Display for 1D2Z

Classification: APOPTOSIS

Total Structure Weight: 59300.45

Macromolecule Entities
Molecule Chains Length Organism Details
DEATH DOMAIN OF PELLE A, C 108 Drosophila melanogaster EC#: 2.7.11.1 IUBMB
Gene Name(s): pll CG5974
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
DEATH DOMAIN OF TUBE B, D 153 Drosophila melanogaster Gene Name(s): tub tube CG10520
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EPE
Query on EPE

C 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID
HEPES (Synonym)
C8 H18 N2 O4 S
JKMHFZQWWAIEOD-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.211
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.12 α = 90.00
b = 87.50 β = 90.00
c = 117.66 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-09-28
  • Released Date: 1999-11-29
  • Deposition author(s): Xiao, T., Towb, P., Wasserman, S.A., Sprang, S.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4