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DNA-NOGALAMYCIN INTERACTIONS
 
 
DOI:10.2210/pdb1d17/pdb   NDB ID: DDFA16
1D17
 
Primary Citation
spinning wheel
 
 
  •  
    Move Section Molecular Description Hide
    Classification: DNA
    Structure Weight: 2625.10
     
    Molecule:DNA (5'-D(*(5CM)P*GP*TP*AP*(5CM)P*G)-3')
    Polymer:1Type:polydeoxyribonucleotideLength:6
    Chains:A
     
     
  •  
    Move Section Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct Go to NCBI Taxonomy entry  
     
     
  •  
    Move Section Ligand Chemical Component Hide
    Identifier Name Formula Interaction View Links
    NGM     NOGALAMYCIN C39 H49 N O16 3DLigand Explorer Link out to Ligand Expos:NGM Link out to SuperLigands:NGM Link out to SuperHapten:NGM
     
     
  •  
    Move Section Modified Residues Hide
    Identifier Name Formula Interaction View Links
    5CM 5-METHYL-2'-DEOXY-CYTIDINE-5'-MONOPHOSPHATE (parent: DC)(type: dnaLinking) C10 H16 N3 O7 P Link out to Ligand Expos:5CM Link out to SuperLigands:5CM Link out to SuperHapten:5CM 2D
     
     
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  •  
    Move Section Deposition Summary Hide
    Authors:   Egli, M.,   Williams, L.D.,   Frederick, C.A.,   Rich, A.

    Deposition:   1990-08-08
    Release:   1991-07-15
    Last Modified (REVDAT):   2009-02-24
     
     
  •  
    Move Section Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Experimental Data:   N/A
    View a histogram of Resolution Resolution[Å]: 2.00
    R-Value: 0.206 (obs.)
    R-Free: n/a
    Space Group: P 61 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 26.30 α = 90.00 
    b = 26.30 β = 90.00 
    c = 100.01 γ = 120.00