1CW9

DNA DECAMER WITH AN ENGINEERED CROSSLINK IN THE MINOR GROOVE

Structural Biology Knowledgebase: 1CW9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1CW9

Classification: DNA

Total Structure Weight: 12464.60

Macromolecule Entities
Molecule Chains Length Organism Details
5'-D(*CP*CP*AP*GP*(G47)P*CP*CP*TP*GP*G)-3' A, B, C, D 10 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
G47
Query on G47
A, B, C, D DNA LINKING C12 H18 N5 O7 P S DG

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.55 Å
  • R-Value Free: 0.232
  • R-Value Work: 0.203
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 34.44 α = 90.00
b = 43.18 β = 90.00
c = 72.41 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-08-26
  • Released Date: 1999-10-14
  • Deposition author(s): van Aalten, D. M. F., Erlanson, D. A., Verdine, G. L., Joshua-Tor, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4