1CVJ

X-RAY CRYSTAL STRUCTURE OF THE POLY(A)-BINDING PROTEIN IN COMPLEX WITH POLYADENYLATE RNA

Structural Biology Knowledgebase: 1CVJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.230

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1CVJ

Classification: GENE REGULATION / RNA

Total Structure Weight: 203098.84


Macromolecule Entities
Molecule Chains Length Organism Details
POLYADENYLATE BINDING PROTEIN 1 A, B, C..., D, E, F, G, HA, B, C, D, E, F, G, H 190 Homo sapiens Fragment: RESIDUES 1-190
Gene Name(s): PABPC1 Gene View PAB1 PABP1 PABPC2
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*AP*AP*AP*AP*AP*AP*AP*AP*AP*AP*A)-3' M, N, O... , P, Q, R, S, T M, N, O, P, Q, R, S, T 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
A
Query on A

A, D, F, H, N, O, Q, S ADENOSINE-5'-MONOPHOSPHATE
C10 H14 N5 O7 P
UDMBCSSLTHHNCD-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.6 Å
  • R-Value Free: 0.304
  • R-Value Work: 0.230
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 79.56 α = 90.00
b = 176.80 β = 117.67
c = 82.49 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-08-23
  • Released Date: 1999-10-04
  • Deposition author(s): Deo, R.C., Bonanno, J.B., Sonenberg, N., Burley, S.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4