1COJ

FE-SOD FROM AQUIFEX PYROPHILUS, A HYPERTHERMOPHILIC BACTERIUM

Structural Biology Knowledgebase: 1COJ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.170

Literature

Macromolecules
Sequence Display for 1COJ

Classification: OXIDOREDUCTASE

Total Structure Weight: 24432.65

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (SUPEROXIDE DISMUTASE) A 212 Aquifex pyrophilus Gene Name(s): sodB sod
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FE
Query on FE

A FE (III) ION
Fe
VTLYFUHAOXGGBS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.170
  • Space Group: I 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 70.70 α = 90.00
b = 75.63 β = 90.00
c = 87.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-05-28
  • Released Date: 1999-06-14
  • Deposition author(s): Lim, J.H., Yu, Y.G., Kim, S.-H., Cho, S.-J., Ahn, B.Y., Han, Y.S., Cho, Y.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values