DNA-BINDING MECHANISM OF THE MONOMERIC ORPHAN NUCLEAR RECEPTOR NGFI-B
DOI:10.2210/pdb1cit/pdb   NDB ID: PD0046
1CIT
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  •   Molecular Description Hide
    Classification: Transcription/dna
    Structure Weight: 20027.21
    Molecule: DNA (5'-D(*CP*CP*GP*AP*AP*AP*AP*GP*GP*TP*CP*AP*TP*GP*CP*G)-3')
    Polymer: 1 Type: dna Length: 16
    Chains: B
    Molecule: DNA (5'-D(*CP*GP*CP*AP*TP*GP*AP*CP*CP*TP*TP*TP*TP*CP*GP*G)-3')
    Polymer: 2 Type: dna Length: 16
    Chains: C
    Molecule: PROTEIN (ORPHAN NUCLEAR RECEPTOR NGFI-B)
    Polymer: 3 Type: protein Length: 89
    Chains: A
    Fragment: DNA-BINDING DOMAIN AND C-TERMINAL EXTENSION
    Organism: Rattus norvegicus
    Gene Names: Nr4a1 Hmr Ngfib
    UniProtKB: Protein Feature View | Search PDB | P22829  
     
  •   Structure Validation Hide

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Rattus norvegicus   Taxonomy   Common Name: Norway rat Expression System: Escherichia coli bl21(de3)  
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    ZN
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    ZN Zn
    ZINC ION
     
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  • Nucleic Acid Database Hide
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Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Meinke, G.,  Sigler, P.B.

    Deposition:   1999-04-05
    Release:   1999-05-03
    Last Modified (REVDAT):   2009-02-24
     
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    2011-07-13
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  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.70
    R-Value: 0.219 (work)
    R-Free: 0.295
    Space Group: P 1 21 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 53.42 α = 90.00 
    b = 34.24 β = 109.13 
    c = 56.26 γ = 90.00