1C97

S642A:ISOCITRATE COMPLEX OF ACONITASE

Structural Biology Knowledgebase: 1C97 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Observed: 0.218

Literature

Macromolecules
Sequence Display for 1C97

Classification: LYASE

Total Structure Weight: 83222.41

Macromolecule Entities
Molecule Chains Length Organism Details
MITOCHONDRIAL ACONITASE A 753 Bos taurus EC#: 4.2.1.3 IUBMB
Mutation: N13H, N26D, S303P, L310V, Q382K, I408V, E528R, R550K, V597I, G600R, K625Q, S642A, A647S, K700Q, T712K, K753Q
Gene Name(s): ACO2 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SF4
Query on SF4

A IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ICT
Query on ICT

A ISOCITRIC ACID
C6 H8 O7
ODBLHEXUDAPZAU-ZAFYKAAXSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
O
Query on O

A OXYGEN ATOM
O
XLYOFNOQVPJJNP-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.98 Å
  • R-Value Observed: 0.218
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 176.40 α = 90.00
b = 71.40 β = 90.00
c = 71.90 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-07-31
  • Released Date: 1999-08-12
  • Deposition author(s): Lloyd, S.J., Lauble, H., Prasad, G.S., Stout, C.D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4