1C84

CRYSTAL STRUCTURE OF PROTEIN TYROSINE PHOSPHATASE 1B COMPLEXED WITH 3-(OXALYL-AMINO)-NAPHTHALENE-2-CARBOXLIC ACID

Structural Biology Knowledgebase: 1C84 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.181

Literature

Macromolecules
Sequence Display for 1C84

Classification: HYDROLASE

Total Structure Weight: 34980.05

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (PROTEIN-TYROSINE PHOSPHATASE 1B) A 298 Homo sapiens EC#: 3.1.3.48 IUBMB
Mutation: S151T, E252D
Gene Name(s): PTPN1 Gene View PTP1B
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
761
Query on 761

A 3-(OXALYL-AMINO)-NAPHTHALENE-2-CARBOXYLIC ACID
C13 H9 N O5
DQBLKSRRWDWNKQ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
761 Ki: 10000 nM (99) BindingDB

Ki: 9900 nM  BindingMOAD
Ki: 9900 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.181
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 88.03 α = 90.00
b = 88.03 β = 90.00
c = 103.98 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2000-04-14
  • Released Date: 2000-05-03
  • Deposition author(s): Andersen, H.S., Iversen, L.F., Branner, S., Rasmussen, H.B., Moller, N.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4