1C6X

ALTERNATE BINDING SITE FOR THE P1-P3 GROUP OF A CLASS OF POTENT HIV-1 PROTEASE INHIBITORS AS A RESULT OF CONCERTED STRUCTURAL CHANGE IN 80'S LOOP.

Structural Biology Knowledgebase: 1C6X SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.200

Literature

Macromolecules
Sequence Display for 1C6X

Classification: HYDROLASE

Total Structure Weight: 22330.88

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (PROTEASE) A, B 99 Human immunodeficiency virus 1 EC#: 3.4.24 IUBMB
Details: NY5 ISOLATE
Gene Name(s): pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
3IN
Query on 3IN

B N-[2(S)-CYCLOPENTYL-1(R)-HYDROXY-3(R)METHYL]- 5-[(2(S)-TERTIARY-BUTYLAMINO-CARBONYL)-4- (N1-(2)-(N-METHYLPIPERAZINYL)-3-CHLORO-PYRAZINYL- 5-CARBONYL)-PIPERAZINO]-4(S)-HYDROXY-2(R)- PHENYLMETHYL-PENTANAMIDE
C37 H55 Cl N8 O5
SQZXWXXIPWXBCL-CYTJBAGBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.300
  • R-Value Work: 0.200
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 88.21 α = 90.00
b = 88.21 β = 90.00
c = 32.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-12-28
  • Released Date: 2000-12-28
  • Deposition author(s): Munshi, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4