1C4K

ORNITHINE DECARBOXYLASE MUTANT (GLY121TYR)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.212

Literature

Macromolecules
Sequence Display for 1C4K

Classification: LYASE

Total Structure Weight: 83526.09

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (ORNITHINE DECARBOXYLASE) A 730 Lactobacillus sp. 30a EC#: 4.1.1.17 IUBMB
Mutation: G121Y
Gene Name(s): odcI
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GTP
Query on GTP

A GUANOSINE-5'-TRIPHOSPHATE
C10 H16 N5 O14 P3
XKMLYUALXHKNFT-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PLP
Query on PLP

A PYRIDOXAL-5'-PHOSPHATE
VITAMIN B6 Phosphate (Synonym)
C8 H10 N O6 P
NGVDGCNFYWLIFO-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.212
  • Space Group: P 32 2 1

Unit Cell:

Length (Å) Angle (°)
a = 111.80 α = 90.00
b = 111.80 β = 90.00
c = 135.90 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-08-26
  • Released Date: 2000-02-26
  • Deposition author(s): Vitali, J., Hackert, M.L.

Revision History

  • 2008-04-26
    Type: Version format compliance
  • 2011-07-13
    Type: Derived calculations, Version format compliance