1C27

E. COLI METHIONINE AMINOPEPTIDASE:NORLEUCINE PHOSPHONATE COMPLEX

Structural Biology Knowledgebase: 1C27 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Observed: 0.170

Literature

Macromolecules
Sequence Display for 1C27

Classification: HYDROLASE

Total Structure Weight: 29518.77

Macromolecule Entities
Molecule Chains Length Organism Details
METHIONINE AMINOPEPTIDASE A 263 Escherichia coli EC#: 3.4.11.18 IUBMB
Fragment: NORLEUCINE PHOSPHONATE
Mutation: R175Q
Details: NORLEUCINE PHOSPHONATE COMPLEX
Gene Name(s): map b0168 JW0163
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NLP
Query on NLP

A (1-AMINO-PENTYL)-PHOSPHONIC ACID
NORLEUCINE PHOSPHONATE (Synonym)
C5 H14 N O3 P
NXTPDFMZKSLVRK-RXMQYKEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CO
Query on CO

A COBALT (II) ION
Co
XLJKHNWPARRRJB-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Observed: 0.170
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 39.30 α = 90.00
b = 67.21 β = 111.52
c = 49.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1999-07-22
  • Released Date: 1999-11-17
  • Deposition author(s): Lowther, W.T., Zhang, Y., Sampson, P.B., Honek, J.F., Matthews, B.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4