1BZC

HUMAN PTP1B CATALYTIC DOMAIN COMPLEXED WITH TPI

Structural Biology Knowledgebase: 1BZC SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 1BZC

Classification: HYDROLASE

Total Structure Weight: 37796.26

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (PROTEIN-TYROSINE-PHOSPHATASE) A 321 Homo sapiens EC#: 3.1.3.48 IUBMB
Fragment: CATALYTIC DOMAIN
Mutation: E252D, D265E
Gene Name(s): PTPN1 Gene View PTP1B
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TPI
Query on TPI

A 4-CARBAMOYL-4-{[6-(DIFLUORO-PHOSPHONO-METHYL)- NAPHTHALENE-2-CARBONYL]-AMINO}-BUTYRIC ACID
C17 H17 F2 N2 O7 P
OWWCIKSGGKYNHT-ZDUSSCGKSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
TPI N/A in BindingDB
Ki: 12000 nM  BindingMOAD
Ki: 12000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.35 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.204
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 88.47 α = 90.00
b = 88.47 β = 90.00
c = 104.62 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-10-27
  • Released Date: 1999-02-16
  • Deposition author(s): Groves, M.R., Yao, Z.J., Jr Burke, T.R., Barford, D.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4