1BYZ

DESIGNED PEPTIDE ALPHA-1, P1 FORM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.9 Å
  • R-Value Observed: 0.085

Literature

Macromolecules
Sequence Display for 1BYZ

Classification: DE NOVO PROTEIN

Total Structure Weight: 6397.42

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (SYNTHETIC DESIGNED PEPTIDE "ALPHA-1") A, B, C, D 13 synthetic Details: N TERMINI ARE ACETYLATED

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MPD
Query on MPD

A, B, D (4S)-2-METHYL-2,4-PENTANEDIOL
C6 H14 O2
SVTBMSDMJJWYQN-YFKPBYRVSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MRD
Query on MRD

D (4R)-2-METHYLPENTANE-2,4-DIOL
C6 H14 O2
SVTBMSDMJJWYQN-RXMQYKEDSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ETA
Query on ETA

A, C ETHANOLAMINE
C2 H7 N O
HZAXFHJVJLSVMW-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

C CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
ACE
Query on ACE
A, B, C, D NON-POLYMER C2 H4 O --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.9 Å
  • R-Value Observed: 0.085
  • Space Group: P 1

Unit Cell:

Length (Å) Angle (°)
a = 20.85 α = 102.40
b = 20.91 β = 95.33
c = 27.06 γ = 119.62

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-10-20
  • Released Date: 1998-10-28
  • Deposition author(s): Prive, G.G., Anderson, D.H., Wesson, L., Cascio, D., Eisenberg, D.

Revision History

  • 2008-04-27
    Type: Version format compliance
  • 2011-07-13
    Type: Atomic model, Version format compliance