1BQ5

NITRITE REDUCTASE FROM ALCALIGENES XYLOSOXIDANS GIFU 1051

Structural Biology Knowledgebase: 1BQ5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.180

Literature

Macromolecules
Sequence Display for 1BQ5

Classification: OXIDOREDUCTASE

Total Structure Weight: 37256.53

Macromolecule Entities
Molecule Chains Length Organism Details
NITRITE REDUCTASE A 342 Achromobacter xylosoxidans Mutation: N231D
Gene Name(s): nir nirK ERS451415_02178
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
CU
Query on CU

A COPPER (II) ION
Cu
JPVYNHNXODAKFH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.05 Å
  • R-Value Free: 0.226
  • R-Value Work: 0.180
  • Space Group: P 63
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 106.57 α = 90.00
b = 106.57 β = 90.00
c = 63.58 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-08-21
  • Released Date: 1999-08-21
  • Deposition author(s): Inoue, T., Gotowda, M., Deligeer, Suzuki, S., Kataoka, K., Yamaguchi, K., Watanabe, H., Goho, M., Yasushi, K.A.I.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values