1BPE

CRYSTAL STRUCTURE OF RAT DNA POLYMERASE BETA; EVIDENCE FOR A COMMON POLYMERASE MECHANISM


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.199

Literature

Macromolecules
Sequence Display for 1BPE

Classification: NUCLEOTIDYLTRANSFERASE

Total Structure Weight: 38909.01

Macromolecule Entities
Molecule Chains Length Organism Details
DNA POLYMERASE BETA A 335 Rattus norvegicus EC#: 2.7.7.7 IUBMB 4.2.99 IUBMB
Mutation: Q90R
Gene Name(s): Polb
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DTP
Query on DTP

A 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE
C10 H16 N5 O12 P3
SUYVUBYJARFZHO-RRKCRQDMSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Observed: 0.199
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 39.32 α = 90.00
b = 68.21 β = 91.77
c = 75.04 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1994-04-12
  • Released Date: 1994-07-31
  • Deposition author(s): Sawaya, M.R., Pelletier, H., Kumar, A., Wilson, S.H., Kraut, J.

Revision History

  • 2008-03-24
    Type: Version format compliance
  • 2011-07-13
    Type: Version format compliance