1BOF

GI-ALPHA-1 BOUND TO GDP AND MAGNESIUM

Structural Biology Knowledgebase: 1BOF SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.227

Literature

Macromolecules
Sequence Display for 1BOF

Classification: SIGNAL TRANSDUCTION PROTEIN

Total Structure Weight: 40927.84

Macromolecule Entities
Molecule Chains Length Organism Details
GI ALPHA 1 A 353 Rattus norvegicus Details: INACTIVE FORM
Gene Name(s): Gnai1 Gnai-1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

A GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.227
  • Space Group: I 4

Unit Cell:

Length (Å) Angle (°)
a = 121.75 α = 90.00
b = 121.75 β = 90.00
c = 68.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-08-04
  • Released Date: 1999-01-06
  • Deposition author(s): Coleman, D.E., Sprang, S.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4