1BO8

THYMIDYLATE SYNTHASE R178T MUTANT

Structural Biology Knowledgebase: 1BO8 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.196

Literature

Macromolecules
Sequence Display for 1BO8

Classification: TRANSFERASE

Total Structure Weight: 36938.04

Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (THYMIDYLATE SYNTHASE) A 316 Lactobacillus casei EC#: 2.1.1.45 IUBMB
Mutation: R178T
Gene Name(s): thyA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
U
Query on U

A URIDINE-5'-MONOPHOSPHATE
C9 H13 N2 O9 P
DJJCXFVJDGTHFX-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
K
Query on K

A POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.196
  • Space Group: P 61 2 2

Unit Cell:

Length (Å) Angle (°)
a = 78.50 α = 90.00
b = 78.50 β = 90.00
c = 241.70 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-08-10
  • Released Date: 1998-08-19
  • Deposition author(s): Morse, R., Finer-Moore, J., Stroud, R.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values