1BNK

HUMAN 3-METHYLADENINE DNA GLYCOSYLASE COMPLEXED TO DNA

Structural Biology Knowledgebase: 1BNK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.216

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1BNK

Classification: HYDROLASE / DNA

Total Structure Weight: 31859.96


Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (3-METHYLADENINE DNA GLYCOSYLASE) A 216 Homo sapiens EC#: 3.2.2.21 IUBMB
Gene Name(s): MPG Gene View AAG ANPG MID1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*AP*CP*AP*TP*GP*YRRP*TP*TP*GP*CP*CP*T)-3') D 13 synthetic
DNA (5'-D(*GP*GP*CP*AP*AP*TP*CP*AP*TP*GP*TP*CP*A)-3') E 13 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
YRR
Query on YRR
D DNA LINKING C5 H12 N O5 P --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.216
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 43.75 α = 90.00
b = 57.10 β = 90.00
c = 128.45 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-07-29
  • Released Date: 1998-10-21
  • Deposition author(s): Lau, A.Y., Schaerer, O.D., Samson, L., Verdine, G.L., Ellenberger, T.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4