1BGV

GLUTAMATE DEHYDROGENASE

Structural Biology Knowledgebase: 1BGV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Work: 0.173

Literature

Macromolecules
Sequence Display for 1BGV

Classification: OXIDOREDUCTASE

Total Structure Weight: 49363.25

Macromolecule Entities
Molecule Chains Length Organism Details
GLUTAMATE DEHYDROGENASE A 449 [clostridium] symbiosum EC#: 1.4.1.2 IUBMB
Details: THE RESIDUE LABELLED B 501, A GLUTAMATE, IS THE ENZYME'S SUBSTRATE WHICH IS BOUND WITHIN THE ACTIVE SITE. IT IS THOUGHT TO AN ONLY PARTIALLY OCCUPIED SITE AND SO ITS OCCUPANCY WAS SET TO 0.53.
Gene Name(s): gdh
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GLU
Query on GLU

A GLUTAMIC ACID
C5 H9 N O4
WHUUTDBJXJRKMK-VKHMYHEASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Observed:
  • Space Group: H 3 2

Unit Cell:

Length (Å) Angle (°)
a = 162.80 α = 90.00
b = 162.80 β = 90.00
c = 102.80 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-06-01
  • Released Date: 1998-10-14
  • Deposition author(s): Stillman, T.J., Baker, P.J., Britton, K.L., Rice, D.W.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values