1BFN

BETA-AMYLASE/BETA-CYCLODEXTRIN COMPLEX

Structural Biology Knowledgebase: 1BFN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.158

Literature

Macromolecules
Sequence Display for 1BFN

Classification: HYDROLASE

Total Structure Weight: 57214.88

Macromolecule Entities
Molecule Chains Length Organism Details
BETA-AMYLASE A 495 Glycine max EC#: 3.2.1.2 IUBMB
Mutation: R202G, K399R
Gene Name(s): BMY1
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GLC
Query on GLC

A ALPHA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-DVKNGEFBSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.07 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.158
  • Space Group: P 31 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.03 α = 90.00
b = 86.03 β = 90.00
c = 144.80 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-05-22
  • Released Date: 1998-10-28
  • Deposition author(s): Adachi, M., Mikami, B., Katsube, T., Utsumi, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4