1BE4

NUCLEOSIDE DIPHOSPHATE KINASE ISOFORM B FROM BOVINE RETINA

Structural Biology Knowledgebase: 1BE4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Work:

Literature

Macromolecules
Sequence Display for 1BE4

Classification: PHOSPHOTRANSFERASE

Total Structure Weight: 52608.56

Macromolecule Entities
Molecule Chains Length Organism Details
NUCLEOSIDE DIPHOSPHATE TRANSFERASE A, B, C 151 Bos taurus EC#: 2.7.4.6 IUBMB
Gene Name(s): NME1-2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PCG
Query on PCG

A, B, C CYCLIC GUANOSINE MONOPHOSPHATE
C10 H12 N5 O7 P
ZOOGRGPOEVQQDX-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Observed:
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 128.61 α = 90.00
b = 128.61 β = 90.00
c = 88.18 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-05-19
  • Released Date: 1999-01-13
  • Deposition author(s): Ladner, J.E., Abdulaev, N.G., Kakuev, D.L., Karaschuk, G.N., Tordova, M., Eisenstein, E., Fujiwara, J.H., Ridge, K.D., Gilliland, G.L.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4