1B5K

3,N4-ETHENO-2'-DEOXYCYTIDINE OPPOSITE THYMIDINE IN AN 11-MER DUPLEX, SOLUTION STRUCTURE FROM NMR AND MOLECULAR DYNAMICS

Structural Biology Knowledgebase: 1B5K SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 2
  • Conformers Submitted: 2
  • Selection Criteria:

Literature

Macromolecules
Sequence Display for 1B5K

Classification: DNA

Total Structure Weight: 6707.46

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*TP*AP*CP*EDCP*CP*AP*TP*GP*C)-3') A 11 synthetic
DNA (5'-D(*GP*CP*AP*TP*GP*TP*GP*TP*AP*CP*G)-3') B 11 synthetic

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
EDC
Query on EDC
A DNA LINKING C11 H14 N3 O7 P --

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 2
  • Conformers Submitted: 2
  • Selection Criteria: --

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-01-07
  • Released Date: 1999-01-13
  • Deposition author(s): Cullinan, D., Korobka, A., Grollman, A.P., Patel, D.J., Eisenberg, M., Santos, C.De L.

Revision History

  • 2012-01-18
    Type: Atom nomenclature | Details: update ligand EDC
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4