1B4N

FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE FROM PYROCOCCUS FURIOSUS, COMPLEXED WITH GLUTARATE


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.177

Literature

Macromolecules
Sequence Display for 1B4N

Classification: OXIDOREDUCTASE

Total Structure Weight: 281665.72

Macromolecule Entities
Molecule Chains Length Organism Details
FORMALDEHYDE FERREDOXIN OXIDOREDUCTASE A, B, C, D 619 Pyrococcus furiosus Fragment: DOMAIN 1/: 1-208, DOMAIN 2/: 209-406, DOMAIN 3/: 407-619
Gene Name(s): PF1203
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PTE
Query on PTE

A, B, C, D TUNGSTOPTERIN COFACTOR
C20 H29 Mg N10 O14 P2 S4 W
PZGYSZZGRVZGLK-VFRDCKAPDP
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SF4
Query on SF4

A, B, C, D IRON/SULFUR CLUSTER
Fe4 S4
LJBDFODJNLIPKO-VKOJMFJBAC
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GUA
Query on GUA

A, B, C, D GLUTARIC ACID
C5 H8 O4
JFCQEDHGNNZCLN-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B, C, D CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.4 Å
  • R-Value Free: 0.244
  • R-Value Work: 0.177
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 100.40 α = 90.00
b = 170.50 β = 90.00
c = 180.70 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-12-24
  • Released Date: 1999-05-18
  • Deposition author(s): Hu, Y.L., Faham, S., Roy, R., Adams, M.W.W., Rees, D.C.

Revision History

  • Version 1_0: 1999-05-18

    Type: Initial release

  • Version 1_1: 2008-03-03

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance

  • Version 1_3: 2011-12-07

    Type: Database references