1AXV

SOLUTION NMR STRUCTURE OF THE [BP]DA ADDUCT OPPOSITE DT IN A DNA DUPLEX, 6 STRUCTURES

Structural Biology Knowledgebase: 1AXV SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: All Conformers Presented

Literature

Macromolecules
Sequence Display for 1AXV

Classification: DNA

Total Structure Weight: 7011.81

Macromolecule Entities
Molecule Chains Length Organism Details
DNA DUPLEX D(CTCTC-[BP]A-CTTCC)D(GGAAGTGAGAG) A 11 synthetic C10 ATOM OF BP-ADDUCT LINKED TO N6 ATOM OF DA6
DNA DUPLEX D(CTCTC-[BP]A-CTTCC)D(GGAAGTGAGAG) B 11 synthetic C10 ATOM OF BP-ADDUCT LINKED TO N6 ATOM OF DA6

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BAP
Query on BAP

A 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE
C20 H16 O3
GFANZDFKCCJYRF-NSISKUIASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: ALL CONFORMERS PRESENTED

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-10-21
  • Released Date: 1998-07-01
  • Deposition author(s): Mao, B., Gu, Z., Gorin, A.A., Chen, J., Hingerty, B.E., Amid, S., Broyde, S., Geacintov, N.E., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4