1AXO

STRUCTURAL ALIGNMENT OF THE (+)-TRANS-ANTI-[BP]DG ADDUCT POSITIONED OPPOSITE DC AT A DNA TEMPLATE-PRIMER JUNCTION, NMR, 6 STRUCTURES


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: All Conformers Were Included

Literature

Macromolecules
Sequence Display for 1AXO

Classification: DNA

Total Structure Weight: 7309.94

Macromolecule Entities
Molecule Chains Length Organism Details
DNA DUPLEX D(AAC-[BP]G-CTACCATCC)D(GGATGGTAGC) A 13 synthetic DCC10 ATOM OF BP LINKED TO N2 ATOM OF DG4
DNA DUPLEX D(AAC-[BP]G-CTACCATCC)D(GGATGGTAGC) B 10 synthetic DCC10 ATOM OF BP LINKED TO N2 ATOM OF DG4

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BAP
Query on BAP

A 1,2,3-TRIHYDROXY-1,2,3,4-TETRAHYDROBENZO[A]PYRENE
C20 H16 O3
GFANZDFKCCJYRF-NSISKUIASA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: ALL CONFORMERS WERE INCLUDED

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-10-16
  • Released Date: 1998-07-01
  • Deposition author(s): Feng, B., Gorin, A.A., Hingerty, B.E., Geacintov, N.E., Broyde, S., Patel, D.J.

Revision History

  • Version 1_0: 1998-07-01

    Type: Initial release

  • Version 1_1: 2008-03-24

    Type: Version format compliance

  • Version 1_2: 2011-07-13

    Type: Version format compliance