NMR Ensemble

1AX6

SOLUTION STRUCTURE OF THE [AF]-C8-DG ADDUCT OPPOSITE A-2 DELETION SITE IN THE NARI HOT SPOT SEQUENCE CONTEXT; NMR, 6 STRUCTURES

Structural Biology Knowledgebase: 1AX6 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: All Conformers Presented

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1AX6

Classification: DNA

Total Structure Weight: 6890.68

Macromolecule Entities
Molecule Chains Length Organism Details
DNA DUPLEX D(CTCGGC-[AF]G-CCATC)D(GATGGCCGAG) A 12 synthetic N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG7
DNA DUPLEX D(CTCGGC-[AF]G-CCATC)D(GATGGCCGAG) B 10 synthetic N ATOM OF AF-GROUP LINKED TO C8 ATOM OF DG7

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
AF
Query on AF

A 2-AMINOFLUORENE
C13 H11 N
CFRFHWQYWJMEJN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 6
  • Conformers Submitted: 6
  • Selection Criteria: ALL CONFORMERS PRESENTED

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-10-30
  • Released Date: 1998-07-01
  • Deposition author(s): Mao, B., Gorin, A.A., Gu, Z., Hingerty, B.E., Broyde, S., Patel, D.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4