1AT3

HERPES SIMPLEX VIRUS TYPE II PROTEASE

Structural Biology Knowledgebase: 1AT3 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.205

Literature

Macromolecules
Sequence Display for 1AT3

Classification: SERINE PROTEASE

Total Structure Weight: 54444.64

Macromolecule Entities
Molecule Chains Length Organism Details
HERPES SIMPLEX VIRUS TYPE II PROTEASE A, B 247 Human alphaherpesvirus 2 Details: DIISOPROPYL PHOSPHATE COVALENTLY BOUND TO ACTIVE SITE SER 129
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
DFP
Query on DFP

A, B DIISOPROPYL PHOSPHONATE
C6 H15 O3 P
BLKXLEPPVDUHBY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.291
  • R-Value Work: 0.205
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 71.72 α = 90.00
b = 87.43 β = 90.00
c = 77.28 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-08-16
  • Released Date: 1998-10-14
  • Deposition author(s): Hoog, S., Smith, W.W., Qiu, X., Abdel-Meguid, S.S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4
  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values