1AP1

THE SOLUTION NMR STRUCTURE OF AN S-STYRENE OXIDE ADDUCT AT THE N2 POSITION OF GUANINE OF AN 11 BASE-PAIR OLIGONUCLEOTIDE SEQUENCE CODING FOR AMINO ACIDS 11-13 OF THE PRODUCT OF THE N-RAS PROTOONCOGENE, MINIMIZED AVERAGE STRUCTURE

Structural Biology Knowledgebase: 1AP1 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: This Structure Provided the Best Fit For the Noe Data Based On the Relaxation Matrix Analysis Using Corma

Literature

Macromolecules
Sequence Display for 1AP1

Classification: DNA

Total Structure Weight: 6829.59

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*GP*CP*AP*GSSP*GP*TP*GP*GP*TP*G)-3') A 11 synthetic HUMAN N-RAS PROTOONCOGENE
DNA (5'-D(*CP*AP*CP*CP*AP*CP*CP*TP*GP*CP*C)-3') B 11 synthetic HUMAN N-RAS PROTOONCOGENE

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
GSS
Query on GSS
A DNA LINKING C18 H22 N5 O8 P DG

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: THIS STRUCTURE PROVIDED THE BEST-FIT FOR THE NOE DATA BASED ON THE RELAXATION MATRIX ANALYSIS USING CORMA

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-07-22
  • Released Date: 1998-07-22
  • Deposition author(s): Setayesh, F.R., Stone, M.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4