NMR Ensemble

1AG5

THE SOLUTION STRUCTURE OF AN AFLATOXIN B1 EPOXIDE ADDUCT AT THE N7 POSITION OF GUANINE OPPOSITE AN ADENINE IN THE COMPLEMENTARY STRAND OF AN OLIGODEOXYNUCLEOTIDE DUPLEX, NMR, MINIMIZED AVERAGE STRUCTURE

Structural Biology Knowledgebase: 1AG5 SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: This Structure Provided the Best Fit For the Noe Data Based On the Relaxation Matrix Analysis Using Corma

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1AG5

Classification: DNA

Total Structure Weight: 6732.55

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*CP*AP*TP*CP*XP*AP*TP*CP*C)-3') A 10 synthetic 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXYAFLATOXIN B1 OPPOSITE CPA IN THE COMPLEMENTARY STRAND
DNA (5'-D(*GP*GP*AP*TP*CP*AP*GP*AP*TP*GP*G)-3') B 11 synthetic 8,9-DIHYDRO-8-(N7-GUANYL)-9-HYDROXYAFLATOXIN B1 OPPOSITE CPA IN THE COMPLEMENTARY STRAND

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
X
Query on X
A DNA LINKING C27 H27 N5 O14 P DG

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1
  • Conformers Submitted: 1
  • Selection Criteria: THIS STRUCTURE PROVIDED THE BEST-FIT FOR THE NOE DATA BASED ON THE RELAXATION MATRIX ANALYSIS USING CORMA

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1997-04-01
  • Released Date: 1997-09-17
  • Deposition author(s): Johnson, D.S., Stone, M.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4