1A78

COMPLEX OF TOAD OVARY GALECTIN WITH THIO-DIGALACTOSE

Structural Biology Knowledgebase: 1A78 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.194

Literature

Macromolecules
Sequence Display for 1A78

Classification: LECTIN

Total Structure Weight: 30322.61

Macromolecule Entities
Molecule Chains Length Organism Details
GALECTIN-1 A, B 134 Rhinella arenarum Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TDG
Query on TDG

A, B THIODIGALACTOSIDE
C12 H22 O10 S
SYKYBMOFPMXDRQ-ZFDCCPEWSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
DTT
Query on DTT

A 2,3-DIHYDROXY-1,4-DITHIOBUTANE
1,4-DITHIOTHREITOL (Synonym)
C4 H10 O2 S2
VHJLVAABSRFDPM-IMJSIDKUSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.194
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 51.80 α = 90.00
b = 51.00 β = 97.20
c = 56.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-03-20
  • Released Date: 1998-10-14
  • Deposition author(s): Amzel, L.M., Bianchet, M.A., Ahmed, H., Vasta, G.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4