1A2K

GDPRAN-NTF2 COMPLEX

Structural Biology Knowledgebase: 1A2K SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.215

Literature

Macromolecules
Sequence Display for 1A2K

Classification: TRANSPORT / NUCLEAR PROTEIN

Total Structure Weight: 103850.55

Macromolecule Entities
Molecule Chains Length Organism Details
NUCLEAR TRANSPORT FACTOR 2 A, B 127 Rattus norvegicus Gene Name(s): Nutf2 Ntf2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
RAN C, D, E 216 Canis lupus EC#: 2.1.1.64 IUBMB
Gene Name(s): RAN Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GDP
Query on GDP

C, D, E GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

E SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

C, D, E MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.273
  • R-Value Work: 0.215
  • Space Group: C 2 2 21

Unit Cell:

Length (Å) Angle (°)
a = 155.15 α = 90.00
b = 120.54 β = 90.00
c = 108.92 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1998-01-06
  • Released Date: 1998-04-29
  • Deposition author(s): Stewart, M., Kent, H.M., Mccoy, A.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4