1A1V

HEPATITIS C VIRUS NS3 HELICASE DOMAIN COMPLEXED WITH SINGLE STRANDED SDNA

Structural Biology Knowledgebase: 1A1V SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.228

Literature

Macromolecules
Sequence Display for 1A1V

Classification: HYDROLASE / DNA

Total Structure Weight: 53735.26


Macromolecule Entities
Molecule Chains Length Organism Details
PROTEIN (NS3 PROTEIN) A 476 Hepatitis c virus Fragment: HELICASE DOMAIN
Mutation: V192A, I248V, C279X, Y418F, C431X, I449T, C499X, L557F, I609V, V615I
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*UP*UP*UP*UP*UP*UP*UP*U)-3') B 8 synthetic SINGLE STRANDED DNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CME
Query on CME
A L-PEPTIDE LINKING C5 H11 N O3 S2 CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.287
  • R-Value Work: 0.228
  • Space Group: P 21 21 2

Unit Cell:

Length (Å) Angle (°)
a = 73.10 α = 90.00
b = 117.50 β = 90.00
c = 63.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-12-17
  • Released Date: 1999-01-13
  • Deposition author(s): Kim, J.L., Morgenstern, K.A., Griffith, J.P., Dwyer, M.D., Thomson, J.A., Murcko, M.A., Lin, C., Caron, P.R.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4