1A0Q

29G11 COMPLEXED WITH PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL] PHOSPHONATE

Structural Biology Knowledgebase: 1A0Q SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.203

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1A0Q

Classification: CATALYTIC ANTIBODY

Total Structure Weight: 47524.14

Macromolecule Entities
Molecule Chains Length Organism Details
29G11 FAB (LIGHT CHAIN) L 212 Mus musculus Fragment: FAB
Mutation: M4L, A22T, N26S, N30K, A34G, G43Q, Q55L, S63R, D92Y, P141S, G187E
Details: PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL]PHOSPHONATE HAPTEN
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
29G11 FAB (HEAVY CHAIN) H 217 Mus musculus Fragment: FAB
Mutation: G8D, P9A, M20I, S31D, Y32H, M34I, G42E, N52S, Y53G, D55G, G56D, T57I, S71A, E81Q, S82AN, Y91L, V93K, ΔG95, R97Y, P98G, Y99R, Y100S, A100AN, M100BV, S108T, V109L
Details: PHENYL [1-(1-N-SUCCINYLAMINO)PENTYL]PHOSPHONATE HAPTEN

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEP
Query on HEP

H PHENYL[1-(N-SUCCINYLAMINO)PENTYL]PHOSPHONATE
C15 H22 N O6 P
FJQWWGCHPFSERW-CQSZACIVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

H, L ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
HEP N/A in BindingDB
Ki: 27 nM  BindingMOAD
Ki: 27 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.275
  • R-Value Work: 0.203
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 36.78 α = 90.00
b = 82.61 β = 90.00
c = 132.34 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 1997-12-05
  • Released Date: 1999-03-02
  • Deposition author(s): Buchbinder, J.L., Stephenson, R.C., Scanlan, T.S., Fletterick, R.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4