NMR Ensemble

108D

THE SOLUTION STRUCTURE OF A DNA COMPLEX WITH THE FLUORESCENT BIS INTERCALATOR TOTO DETERMINED BY NMR SPECTROSCOPY

Structural Biology Knowledgebase: 108D SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 40
  • Selection Criteria:

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 108D

Classification: DNA

Total Structure Weight: 5650.40

Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*CP*GP*CP*TP*AP*GP*CP*G)-3') A, B 8 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
TOT
Query on TOT

A 1,1-(4,4,8,8-TETRAMETHYL-4,8-DIAZAUNDECAMETHYLENE)- BIS-4-3-METHYL-2,3-DIHYDRO-(BENZO-1,3-THIAZOLE)- 2-METHYLIDENE)-QUINOLINIUM
C49 H58 N6 S2
RUIOCPBCVXVVMB-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: --
  • Conformers Submitted: 40
  • Selection Criteria: --

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1995-01-31
  • Released Date: 1995-06-03
  • Deposition author(s): Spielmann, H.P., Wemmer, D.E., Jacobsen, J.P.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4