Download MendeleyStructure of DDR2 DS domain in complex with VHH
Talagas, A., Nawrotek, A., Vuillard, L.M., Miallau, L.To be published.
7AZB
Structure of DDR2 DS domain in complex with VHH
- PDB DOI: https://doi.org/10.2210/pdb7AZB/pdb
- Classification: MEMBRANE PROTEIN
- Organism(s): Homo sapiens
- Expression System: Drosophila melanogaster, Escherichia coli
- Mutation(s): No
- Deposited: 2020-11-16 Released: 2020-11-25
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.62 Å
- R-Value Free: 0.299
- R-Value Work: 0.210
- R-Value Observed: 0.214
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Discoidin domain-containing receptor 2 | 168 | Homo sapiens | Mutation(s): 0 Gene Names: DDR2, NTRKR3, TKT, TYRO10 EC: 2.7.10.1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for Q16832 (Homo sapiens) Explore Q16832 Go to UniProtKB: Q16832 | |||||
PHAROS: Q16832 GTEx: ENSG00000162733 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q16832 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| VHH | 153 | Homo sapiens | Mutation(s): 0 |  | |
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
Sequence AnnotationsExpand | |||||
| |||||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.62 Å
- R-Value Free: 0.299
- R-Value Work: 0.210
- R-Value Observed: 0.214
- Space Group: P 31 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 63.244 | α = 90 |
| b = 63.244 | β = 90 |
| c = 120.854 | γ = 120 |
| Software Name | Purpose |
|---|---|
| BUSTER | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
| BUSTER | phasing |
Entry History
Deposition Data
- Released Date: 2020-11-25 Deposition Author(s): Talagas, A., Nawrotek, A., Arrial, A., Vuillard, L.M., Miallau, L.
Revision History (Full details and data files)
- Version 1.0: 2020-11-25
Type: Initial release - Version 1.1: 2024-01-31
Changes: Data collection, Database references, Refinement description
